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Linux science software

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liblinear A library for Large Linear Classification
lamprop Calculates properties of fiber reinforced composites
kst Data viewing program for KDE
hdf5 Hierarchical Data Format library (from NCSA)
gchemutils C++ classes and Gtk2 widgets related to chemistry
gchempaint 2D chemical structures editor for GNOME 2
cdo Climate Data Operators
afni Advanced Functional Neuro Imaging
xmakemol Molecule Viewer Program Based on Motif Widget
xloops-ginac A program calculating Feynman diagrams

All linux science software (ordered by name)

2dhf A Numerical Hartree-Fock Program for Diatomic Molecules
at The Acoustic ToolBox includes four acoustic models
bblimage A set of software tools for medical image processing
cdcl Scientific graphic library for geoscience
chemtool Draw organic molecules easily and store them
chemtool-devel Drawing organic molecules easily and store them (developer version)
clhep Object-oriented toolkit for particle physics applications by CERN
dft++ DFT++, A density functional software
euler A program computes with real and complex numbers and matrices
felt A system for Finite Element Analysis
flounder A quick way to visualize regularly spaced 4D data
gave A gtk+ based grid data analyser and viewer written in Ruby
gchempaint 2D chemical structures editor for GNOME 2
gchemutils C++ classes and Gtk2 widgets related to chemistry
gdis Display and manipulation of isolated molecules and periodic systems
ghemical Ghemical is a computational chemistry software package
glens OpenGL gravitational lens simulator
gramps A GTK/GNOME-based genealogy program
hdf Hierarchical Data Format library (from NCSA)
hdf5 Hierarchical Data Format library (from NCSA)
kmovisto A real 3-D molecule viewer
kst Data viewing program for KDE
libctl Control Language Library
libsvm A library for Support Vector Machines
mayavi A scientific data visualizer
mmtk An Open Source program library for molecular simulation applications
mpb MIT Photonic-Bands
mpqc The massively parallel quantum computing library and program
oases Ocean Acoustics and Seismic Exploration Synthesis
openbabel Chemistry file translation program
ovt The Orbit Visualization Tool
p5-Chemistry-Elements Perl extension for working with Chemical Elements
psi3 An electronic structure programs for high-accuracy computations
ruby-dcl A Ruby interface to the scientific graphic library DCL
ruby-gphys A multi-purpose class to handle gridded physical quantities
simlib SIMulation LIBrary for C++ programming language
vis5d+ OpenGL-based volumetric visualization program for scientific datasets
xloops-ginac A program calculating Feynman diagrams
xmakemol Molecule Viewer Program Based on Motif Widget
abinit Abinit calculates electronic structure of systems
vmd A molecular visualization program
py-scipy Scientific tools for Python
buddy A Binary Decision Diagram library
dcl Scientific graphic library for geoscience
devisor Design and Visualization Software Resource for FeatFlow
getdp A rather general finite element solver using mixed finite elements
gromacs Compute molecular dynamics
gsystem A multi-user virtual reality evolution and life simulation framework
isaac-cfd Integrated Solution Algorithm for Arbitrary Configuration
lamprop Calculates properties of fiber reinforced composites
libsvm-python
mbdyn A MultiBody Dynamics analysis system
mcstas A neutron ray-trace simulation package
omnetpp A discrete event simulation environment
paraview ParaView is a powerful scientific data visualization application
qcl A quantum computer simulator
szip Lossless compression library for scientific data
udunits A library for manipulating units of physical quantities
x11iraf Provides graphical tools to work with IRAF
gerris A scientific CFD simulator
gnudatalanguage
py-paida Pure Python scientific analysis package
InsightToolkit Insight Toolkit
afni Advanced Functional Neuro Imaging
dtiquery Stanford DTI Visualization tool
bft Code_Saturne Base Functions and Types library
bodr Chemistry data like element and isotope properties, atomic radii, etc
cdf Device independent view of the CDF data model
cdo Climate Data Operators
cgnslib CFD General Notation System library code CFD General Notation System library code CFD General Notation System library code
chemical-mime-data A collection of chemical MIME types for UNIX desktops
crf++ Yet Another CRF toolkit
ecs Code_Saturne Preprocessor
elmer-eio ELMER FEM Package Data base Interface
elmer-fem FEM solver for use in the ELMER FEM package
elmer-hutiter HUTIter library for use in the ELMER FEM package
elmer-matc MatC language library used by ELMER FEM package
elmer-meshgen2d A Mesh Generation Utility for use with the ELMER FEM package
elmerfront Graphical User Interface for the ELMER FEM package
elmergrid A Mesh Manipulation Utility for use with the ELMER FEM package
elmerpost Visualization of Numerical Results in the ELMER FEM package
fastcap A three-dimensional capacitance extraction program A three-dimensional capacitance extraction program A three-dimensional capacitance extraction program
fasthenry A multipole-accelerated inductance analysis program A multipole-accelerated inductance analysis program A multipole-accelerated inductance analysis program
fvm Code_Saturne Finite Volume Mesh
g3data Utility for extracting data from graphs
gamess A freely obtainable ab-initio molecular orbital calculation program
ghmm General Hidden Markov Model Library in C
gsmc Smith chart program for impedance matching
gtamsanalyzer Qualitative Research Software for the Free World for GNUstep
gwyddion A gtk2 based SPM data visualization and analysis tool
ics Code_Saturne Graphical User Interface
libghemical Support libraries of science/ghemical port
libint Evaluate the integrals in modern atomic and molecular theory
liblinear A library for Large Linear Classification
linsmith Smith charting program
medit Interactive meshes visualization
minc Medical Imaging NetCDF
minc2 Medical Imaging NetCDF
ncs Code_Saturne Kernel
netcdf Library for machine-independent, array-oriented data access
nifticlib Neuroimaging Infoirmatics Technology Initiative data format
oof Finite Element Analysis of Real Material Microstructures
openfoam Open Field Operation and Manipulation - CFD Simulation Toolbox
p5-Algorithm-SVMLight Perl interface to SVMLight Machine-Learning Package
paje Generic visualization tool for GNUstep (Gantt chart and more)
pcp Machine learning program for pattern classification
pnetcdf A library providing high-performance I/O
svmlight An implementation of Support Vector Machines (SVMs) in C
v_sim Visualization of atomic structures
xmds XMDS is a code generator that integrates equations; XMDS is a code generator that integrates equations; XMDS is a code generator that integrates equations;
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